, including all inherited members.
add_extra_points() | KNNR | |
add_point(double energy, double *xyz, double *grad, double *hess) | KNNR | |
anames | KNNR | [private] |
anumbers | KNNR | [private] |
begin(int runnum, int natoms0) | KNNR | |
compare_add_files(int npts1, string *filesxyz1, string *filesgrad1, string *fileshess1, string *newfilesxyz, string *newfilesgrad, string *newfileshess) | KNNR | [private] |
distances | KNNR | [private] |
distancesu | KNNR | [private] |
energies | KNNR | [private] |
file0 | KNNR | [private] |
filesgrad | KNNR | [private] |
fileshess | KNNR | [private] |
filesxyz | KNNR | [private] |
find_knn(int pt, int k, int *knn, double *knnd, int type) | KNNR | [private] |
find_knn_xyz(double *coords, int k, int *knn, double *knnd, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
freemem() | KNNR | |
get_distance(double *xyz1, double *xyz2, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
get_distance_u(double *xyz1, double *xyz2, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
get_distances(int npts, double **xyz, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
get_distances_u(int npts, int pt, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
get_dqpic(double *dq1, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
get_files(string fileprefix, string filesuffix, string *files) | KNNR | [private] |
grad_knnr(double *coords, double &E1, double *grads, double *Ut, int k) | KNNR | |
grads | KNNR | [private] |
hess | KNNR | [private] |
id | KNNR | [private] |
nangles | KNNR | [private] |
natoms | KNNR | [private] |
nbonds | KNNR | [private] |
nic | KNNR | [private] |
npts | KNNR | |
ntor | KNNR | [private] |
predict_point(int pt, int k, ICoord &ic1, ICoord &ic2) | KNNR | [private] |
printl | KNNR | |
read_hess(int nic, string *filenames) | KNNR | [private] |
read_ics(int &nbonds, int **bonds, int &nangles, int **angles, int &ntor, int **torsions, string filename) | KNNR | [private] |
read_one_hess(int n, int nic, string filename) | KNNR | [private] |
read_one_xyz(int n, string filename, double *coords) | KNNR | [private] |
read_xyzs(double *energies, double **xyz, string *filenames) | KNNR | [private] |
reassign_mem(int npts1) | KNNR | [private] |
release_ic(ICoord &ic1, ICoord &ic2) | KNNR | [private] |
runnum | KNNR | [private] |
setup_ic(ICoord &ic1, ICoord &ic2) | KNNR | [private] |
test_points(int k0) | KNNR | |
useH | KNNR | [private] |
xyz | KNNR | [private] |
xyz_read(string *anames, double *coords, string xyzfile) | KNNR | [private] |